EDAM - Bioscientific data analysis ontology

Last uploaded: February 26, 2021
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Preferred Name

Sequence assembly
Synonyms

Contigs

SO:0000353

SO:0001248
Definitions

An assembly of fragments of a (typically genomic) DNA sequence. Typically, an assembly is a collection of contigs (for example ESTs and genomic DNA fragments) that are ordered, aligned and merged. Annotation of the assembled sequence might be included.
ID

http://edamontology.org/data_0925
comment

Typically, an assembly is a collection of contigs (for example ESTs and genomic DNA fragments) that are ordered, aligned and merged. Annotation of the assembled sequence might be included.
Created in

beta12orEarlier
hasDefinition

An assembly of fragments of a (typically genomic) DNA sequence.
hasExactSynonym

Contigs

SO:0000353
hasNarrowSynonym

SO:0001248
inSubset

http://edamontology.org/bio

http://edamontology.org/data
label

Sequence assembly
prefixIRI

data_0925
prefLabel

Sequence assembly
seeAlso

http://en.wikipedia.org/wiki/Sequence_assembly
subClassOf

http://edamontology.org/data_1234
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Delete Mapping To Ontology Source
http://edamontology.org/data_0925 ITO SAME_URI
http://purl.obolibrary.org/obo/SO_0000353 SO LOOM
http://semanticscience.org/resource/sequence-assembly MATERIALSMINE LOOM
http://semanticscience.org/resource/SIO_000989 SIO LOOM
http://purl.obolibrary.org/obo/SO_0000353 HOIP LOOM
http://gbol.life/0.1/SequenceAssembly GBOL LOOM
http://purl.obolibrary.org/obo/SO_0000353 PDRO LOOM
http://purl.obolibrary.org/obo/SO_0000353 EUPATH LOOM
http://purl.obolibrary.org/obo/SO_0000353 OBI LOOM
http://purl.obolibrary.org/obo/SO_0000353 NGBO LOOM
http://purl.obolibrary.org/obo/SO_0000353 OBCS LOOM
http://purl.obolibrary.org/obo/SO_0000353 ONE LOOM
http://purl.obolibrary.org/obo/SO_0000353 EGO LOOM
http://purl.obolibrary.org/obo/SO_0000353 OBI_IEE LOOM
http://purl.obolibrary.org/obo/SO_0000353 NIFSTD LOOM
http://purl.obolibrary.org/obo/SO_0000353 GENEPIO LOOM
http://edamontology.org/topic_0196 BERO LOOM
http://edamontology.org/topic_0196 ITO LOOM
http://edamontology.org/topic_0196 BMT LOOM
http://semanticscience.org/resource/SIO_000989 HHEARP LOOM
http://semanticscience.org/resource/SIO_000989 CHEAR LOOM
http://semanticscience.org/resource/SIO_000989 BIOMO LOOM
http://semanticscience.org/resource/SIO_000989 SCO LOOM
http://semanticscience.org/resource/SIO_000989 HHEAR LOOM
http://semanticscience.org/resource/SIO_000989 HASCO LOOM
http://edamontology.org/data_0925 ITO LOOM
http://edamontology.org/operation_0310 NGSONTO LOOM
http://edamontology.org/operation_0310 ITO LOOM