EDAM - Bioscientific data analysis ontology

Last uploaded: February 26, 2021
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Preferred Name

Profile HMM
Synonyms
Definitions

A profile HMM is a variant of a Hidden Markov model that is derived specifically from a set of (aligned) biological sequences. Profile HMMs provide the basis for a position-specific scoring system, which can be used to align sequences and search databases for related sequences.
ID

http://edamontology.org/data_3949
Created in

1.24
hasDefinition

A profile HMM is a variant of a Hidden Markov model that is derived specifically from a set of (aligned) biological sequences. Profile HMMs provide the basis for a position-specific scoring system, which can be used to align sequences and search databases for related sequences.
inSubset

http://edamontology.org/bio

http://edamontology.org/data
label

Profile HMM
prefixIRI

data_3949
prefLabel

Profile HMM
seeAlso

https://en.wikipedia.org/wiki/HMMER#Profile_HMMs
subClassOf

http://edamontology.org/data_1354

http://edamontology.org/data_1364
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