EDAM - Bioscientific data analysis ontology

Last uploaded: February 26, 2021
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Preferred Name

BIOM format
Synonyms

BIological Observation Matrix format

biom
Definitions

The BIological Observation Matrix (BIOM) is a format for representing biological sample by observation contingency tables in broad areas of comparative omics. The primary use of this format is to represent OTU tables and metagenome tables. BIOM is a recognised standard for the Earth Microbiome Project, and is a project supported by Genomics Standards Consortium. Supported in QIIME, Mothur, MEGAN, etc.
ID

http://edamontology.org/format_3746
comment

BIOM is a recognised standard for the Earth Microbiome Project, and is a project supported by Genomics Standards Consortium. Supported in QIIME, Mothur, MEGAN, etc.
Citation

http://doi.org/10.1186/2047-217X-1-7
Created in

1.15
Documentation

http://biom-format.org
File extension

biom
hasDefinition

The BIological Observation Matrix (BIOM) is a format for representing biological sample by observation contingency tables in broad areas of comparative omics. The primary use of this format is to represent OTU tables and metagenome tables.
hasExactSynonym

BIological Observation Matrix format

biom
inSubset

http://edamontology.org/bio

http://edamontology.org/formats
label

BIOM format
prefixIRI

format_3746
prefLabel

BIOM format
subClassOf

http://edamontology.org/format_3706

http://edamontology.org/format_2330
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