EDAM - Bioscientific data analysis ontology - GFA 1 - Classes

Last uploaded: February 26, 2021

Preferred Name	GFA 1
Synonyms	Graphical Fragment Assembly (GFA) 1.0
Definitions	Graphical Fragment Assembly captures sequence graphs as the product of an assembly, a representation of variation in genomes, splice graphs in genes, or even overlap between reads from long-read sequencing technology.
ID	http://edamontology.org/format_3975
Created in	1.25
Documentation	http://gfa-spec.github.io/GFA-spec/
Example	https://raw.githubusercontent.com/sjackman/gfalint/master/examples/big1.gfa
File extension	gfa
hasDefinition	Graphical Fragment Assembly captures sequence graphs as the product of an assembly, a representation of variation in genomes, splice graphs in genes, or even overlap between reads from long-read sequencing technology.
hasExactSynonym	Graphical Fragment Assembly (GFA) 1.0
inSubset	http://edamontology.org/bio http://edamontology.org/formats
label	GFA 1
Organisation	https://github.com/GFA-spec
prefixIRI	format_3975
prefLabel	GFA 1
seeAlso	https://gfa-spec.github.io/GFA-spec/GFA2.html#backward-compatibility-with-gfa-1
subClassOf	http://edamontology.org/format_2561 http://edamontology.org/format_2330

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Delete	Mapping To	Ontology	Source
	http://purl.obolibrary.org/obo/NCBIGene_853757	CCO	LOOM