EDAM - Bioscientific data analysis ontology

Last uploaded: February 26, 2021
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Preferred Name

Repeat sequence analysis
Synonyms
Definitions

Find and/or analyse repeat sequences in (typically nucleotide) sequences. Repeat sequences include tandem repeats, inverted or palindromic repeats, DNA microsatellites (Simple Sequence Repeats or SSRs), interspersed repeats, maximal duplications and reverse, complemented and reverse complemented repeats etc. Repeat units can be exact or imperfect, in tandem or dispersed, of specified or unspecified length.
ID

http://edamontology.org/operation_0237
comment

Repeat sequences include tandem repeats, inverted or palindromic repeats, DNA microsatellites (Simple Sequence Repeats or SSRs), interspersed repeats, maximal duplications and reverse, complemented and reverse complemented repeats etc. Repeat units can be exact or imperfect, in tandem or dispersed, of specified or unspecified length.
Created in

beta12orEarlier
hasDefinition

Find and/or analyse repeat sequences in (typically nucleotide) sequences.
inSubset

http://edamontology.org/bio

http://edamontology.org/operations
label

Repeat sequence analysis
prefixIRI

operation_0237
prefLabel

Repeat sequence analysis
subClassOf

http://edamontology.org/operation_2403
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