Preferred Name

PCR primer design

Synonyms

Primer design

PCR primer prediction

PCR primer design (for genotyping polymorphisms)

PCR primer design (based on gene structure)

PCR primer design (for conserved primers)

PCR primer design (for large scale sequencing)

Primer quality estimation

PCR primer design (for gene transcription profiling)

PCR primer design (for methylation PCRs)

Definitions

Design or predict oligonucleotide primers for PCR and DNA amplification etc. This includes predicting primers based on gene structure, promoters, exon-exon junctions, predicting primers that are conserved across multiple genomes or species, primers for for gene transcription profiling, for genotyping polymorphisms, for example single nucleotide polymorphisms (SNPs), for large scale sequencing, or for methylation PCRs. Primer design involves predicting or selecting primers that are specific to a provided PCR template. Primers can be designed with certain properties such as size of product desired, primer size etc. The output might be a minimal or overlapping primer set.

ID

http://edamontology.org/operation_0308

comment

This includes predicting primers based on gene structure, promoters, exon-exon junctions, predicting primers that are conserved across multiple genomes or species, primers for for gene transcription profiling, for genotyping polymorphisms, for example single nucleotide polymorphisms (SNPs), for large scale sequencing, or for methylation PCRs.

Primer design involves predicting or selecting primers that are specific to a provided PCR template. Primers can be designed with certain properties such as size of product desired, primer size etc. The output might be a minimal or overlapping primer set.

Created in

beta12orEarlier

hasDefinition

Design or predict oligonucleotide primers for PCR and DNA amplification etc.

hasExactSynonym

Primer design

PCR primer prediction

hasNarrowSynonym

PCR primer design (for genotyping polymorphisms)

PCR primer design (based on gene structure)

PCR primer design (for conserved primers)

PCR primer design (for large scale sequencing)

Primer quality estimation

PCR primer design (for gene transcription profiling)

PCR primer design (for methylation PCRs)

inSubset

http://edamontology.org/bio

http://edamontology.org/operations

label

PCR primer design

prefixIRI

operation_0308

prefLabel

PCR primer design

seeAlso

https://en.wikipedia.org/wiki/Primer_(molecular_biology)#PCR_primer_design

subClassOf

http://edamontology.org/operation_2419

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