EDAM - Bioscientific data analysis ontology - Sequence alignment analysis (conservation) - Classes

Last uploaded: February 26, 2021

Preferred Name	Sequence alignment analysis (conservation)
Synonyms	Residue conservation analysis
Definitions	Analyse character conservation in a molecular sequence alignment, for example to derive a consensus sequence. Use this concept for methods that calculate substitution rates, estimate relative site variability, identify sites with biased properties, derive a consensus sequence, or identify highly conserved or very poorly conserved sites, regions, blocks etc.
ID	http://edamontology.org/operation_0448
comment	Use this concept for methods that calculate substitution rates, estimate relative site variability, identify sites with biased properties, derive a consensus sequence, or identify highly conserved or very poorly conserved sites, regions, blocks etc.
Created in	beta12orEarlier
hasDefinition	Analyse character conservation in a molecular sequence alignment, for example to derive a consensus sequence.
hasExactSynonym	Residue conservation analysis
inSubset	http://edamontology.org/bio http://edamontology.org/operations
label	Sequence alignment analysis (conservation)
prefixIRI	operation_0448
prefLabel	Sequence alignment analysis (conservation)
subClassOf	http://edamontology.org/operation_0258

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Delete	Mapping To	Ontology	Source
	http://edamontology.org/operation_0448	ITO	SAME_URI
	http://edamontology.org/operation_0448	ITO	LOOM