EDAM - Bioscientific data analysis ontology

Last uploaded: February 26, 2021
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Preferred Name

Tree-based sequence alignment
Synonyms

Sequence alignment (phylogenetic tree-based)

Multiple sequence alignment construction (phylogenetic tree-based)

Sequence alignment generation (phylogenetic tree-based)

Multiple sequence alignment (phylogenetic tree-based)

Phylogenetic tree-based multiple sequence alignment construction
Definitions

Align multiple sequences using relative gap costs calculated from neighbors in a supplied phylogenetic tree. This is supposed to give a more biologically meaningful alignment than standard alignments.
ID

http://edamontology.org/operation_0499
comment

This is supposed to give a more biologically meaningful alignment than standard alignments.
Created in

beta12orEarlier
hasDefinition

Align multiple sequences using relative gap costs calculated from neighbors in a supplied phylogenetic tree.
hasExactSynonym

Sequence alignment (phylogenetic tree-based)

Multiple sequence alignment construction (phylogenetic tree-based)

Sequence alignment generation (phylogenetic tree-based)

Multiple sequence alignment (phylogenetic tree-based)

Phylogenetic tree-based multiple sequence alignment construction
inSubset

http://edamontology.org/bio

http://edamontology.org/operations
label

Tree-based sequence alignment
prefixIRI

operation_0499
prefLabel

Tree-based sequence alignment
subClassOf

http://edamontology.org/operation_0292
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