Preferred Name

Protein residue surface calculation (vacuum molecular)

Synonyms
Definitions

Solvent accessibility might be calculated for the backbone, sidechain and total (backbone plus sidechain). Calculate the solvent accessibility ('vacuum molecular surface') for each residue in a structure. This is the accessibility of the residue when taken out of the protein together with the backbone atoms of any residue it is covalently bound to.

ID

http://edamontology.org/operation_1822

Obsolete

true

comment

Solvent accessibility might be calculated for the backbone, sidechain and total (backbone plus sidechain).

Created in

beta12orEarlier

deprecated

true

hasDefinition

Calculate the solvent accessibility ('vacuum molecular surface') for each residue in a structure. This is the accessibility of the residue when taken out of the protein together with the backbone atoms of any residue it is covalently bound to.

inSubset

http://edamontology.org/obsolete

label

Protein residue surface calculation (vacuum molecular)

Obsolete since

1.12

Old parent

http://www.w3.org/2002/07/owl#Thing

prefixIRI

operation_1822

prefLabel

Protein residue surface calculation (vacuum molecular)

replacedBy

http://edamontology.org/operation_0387

subClassOf

http://www.w3.org/2002/07/owl#DeprecatedClass

Delete Subject Author Type Created
No notes to display
Create mapping

Delete Mapping To Ontology Source
There are currently no mappings for this class.