EDAM - Bioscientific data analysis ontology - Bisulfite mapping - Classes

Last uploaded: February 26, 2021

Preferred Name	Bisulfite mapping
Synonyms	Bisulfite sequence mapping Bisulfite read mapping Bisulfite sequence alignment
Definitions	The mapping of methylation sites in a DNA (genome) sequence. Typically, the mapping of high-throughput bisulfite reads to the reference genome. Bisulfite mapping follows high-throughput sequencing of DNA which has undergone bisulfite treatment followed by PCR amplification; unmethylated cytosines are specifically converted to thymine, allowing the methylation status of cytosine in the DNA to be detected.
ID	http://edamontology.org/operation_3186
comment	Bisulfite mapping follows high-throughput sequencing of DNA which has undergone bisulfite treatment followed by PCR amplification; unmethylated cytosines are specifically converted to thymine, allowing the methylation status of cytosine in the DNA to be detected.
Created in	1.1
hasDefinition	The mapping of methylation sites in a DNA (genome) sequence. Typically, the mapping of high-throughput bisulfite reads to the reference genome.
hasExactSynonym	Bisulfite sequence mapping Bisulfite read mapping Bisulfite sequence alignment
inSubset	http://edamontology.org/bio http://edamontology.org/operations
label	Bisulfite mapping
prefixIRI	operation_3186
prefLabel	Bisulfite mapping
subClassOf	http://edamontology.org/operation_3204 http://edamontology.org/operation_2944

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Delete	Mapping To	Ontology	Source
	http://edamontology.org/operation_3186	ITO	SAME_URI
	http://edamontology.org/operation_3186	ITO	LOOM