Preferred Name

Sequence trimming

Synonyms

Trimming

Trim to reference

Barcode sequence removal

Trim vector

Trim ends

Definitions

Cut (remove) the end from a molecular sequence. This includes end trimming, -- Trim sequences (typically from an automated DNA sequencer) to remove misleading ends. For example trim polyA tails, introns and primer sequence flanking the sequence of amplified exons, or other unwanted sequence.-- trimming to a reference sequence, --Trim sequences (typically from an automated DNA sequencer) to remove the sequence ends that extend beyond an assembled reference sequence. -- vector trimming -- Trim sequences (typically from an automated DNA sequencer) to remove sequence-specific end regions, typically contamination from vector sequences.

ID

http://edamontology.org/operation_3192

comment

This includes end trimming, -- Trim sequences (typically from an automated DNA sequencer) to remove misleading ends. For example trim polyA tails, introns and primer sequence flanking the sequence of amplified exons, or other unwanted sequence.-- trimming to a reference sequence, --Trim sequences (typically from an automated DNA sequencer) to remove the sequence ends that extend beyond an assembled reference sequence. -- vector trimming -- Trim sequences (typically from an automated DNA sequencer) to remove sequence-specific end regions, typically contamination from vector sequences.

Created in

1.1

hasDefinition

Cut (remove) the end from a molecular sequence.

hasExactSynonym

Trimming

hasNarrowSynonym

Trim to reference

Barcode sequence removal

Trim vector

Trim ends

inSubset

http://edamontology.org/bio

http://edamontology.org/operations

label

Sequence trimming

prefixIRI

operation_3192

prefLabel

Sequence trimming

subClassOf

http://edamontology.org/operation_0369

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