EDAM - Bioscientific data analysis ontology

Last uploaded: February 26, 2021
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Preferred Name

k-mer counting
Synonyms
Definitions

Count k-mers (substrings of length k) in DNA sequence data. k-mer counting is used in genome and transcriptome assembly, metagenomic sequencing, and for error correction of sequence reads.
ID

http://edamontology.org/operation_3472
comment

k-mer counting is used in genome and transcriptome assembly, metagenomic sequencing, and for error correction of sequence reads.
Created in

1.7
hasDefinition

Count k-mers (substrings of length k) in DNA sequence data.
inSubset

http://edamontology.org/bio

http://edamontology.org/operations
label

k-mer counting
prefixIRI

operation_3472
prefLabel

k-mer counting
subClassOf

http://edamontology.org/operation_0236
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