EDAM - Bioscientific data analysis ontology

Last uploaded: February 26, 2021
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Preferred Name

Sequence alignment
Synonyms
Definitions

This includes the generation of alignments (the identification of equivalent sites), the analysis of alignments, editing, visualisation, alignment databases, the alignment (equivalence between sites) of sequence profiles (representing sequence alignments) and so on. The alignment of molecular sequences or sequence profiles (representing sequence alignments).
ID

http://edamontology.org/topic_0182
Obsolete

true
comment

This includes the generation of alignments (the identification of equivalent sites), the analysis of alignments, editing, visualisation, alignment databases, the alignment (equivalence between sites) of sequence profiles (representing sequence alignments) and so on.
Created in

beta12orEarlier
deprecated

true
hasDefinition

The alignment of molecular sequences or sequence profiles (representing sequence alignments).
inSubset

http://edamontology.org/obsolete
label

Sequence alignment
Obsolete since

1.7
Old parent

http://www.w3.org/2002/07/owl#Thing
prefixIRI

topic_0182
prefLabel

Sequence alignment
replacedBy

http://edamontology.org/topic_0080
subClassOf

http://www.w3.org/2002/07/owl#DeprecatedClass
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http://edamontology.org/topic_0182 BMT SAME_URI
http://semanticscience.org/resource/sequence-alignment MATERIALSMINE LOOM
http://semanticscience.org/resource/SIO_010066 SIO LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#E05.393.751 RH-MESH LOOM
http://localhost/plosthes.2017-1#1558 PLOSTHES LOOM
http://semanticscience.org/resource/SIO_010066 HHEARP LOOM
http://semanticscience.org/resource/SIO_010066 CHEAR LOOM
http://semanticscience.org/resource/SIO_010066 BIOMO LOOM
http://semanticscience.org/resource/SIO_010066 SCO LOOM
http://semanticscience.org/resource/SIO_010066 HHEAR LOOM
http://semanticscience.org/resource/SIO_010066 HASCO LOOM
http://edamontology.org/topic_0182 BMT LOOM
http://edamontology.org/data_0863 ITO LOOM
http://bioontology.org/ontologies/BiomedicalResourceOntology.owl#Sequence_Alignment REGN_BRO LOOM
http://bioontology.org/ontologies/BiomedicalResourceOntology.owl#Sequence_Alignment BRO LOOM
http://bioontology.org/ontologies/BiomedicalResourceOntology.owl#Sequence_Alignment BRO_ACRONYM LOOM
http://www.cvrgrid.org/files/ECGOntologyv1.owl#ECG_000000196 ECG LOOM
http://phenomebrowser.net/ontologies/mesh/mesh.owl#D016415 RH-MESH LOOM
http://purl.jp/bio/4/id/200906047540004369 IOBC LOOM
http://purl.obolibrary.org/obo/OMIT_0016921 OMIT LOOM
http://edamontology.org/operation_0292 ITO LOOM
http://www.bioassayontology.org/bao#BAO_0002231 BAO LOOM
http://www.ebi.ac.uk/swo/objective/SWO_7000002 SWO LOOM
http://purl.obolibrary.org/obo/OBI_0002567 PDRO LOOM
http://purl.obolibrary.org/obo/OBI_0002567 OBI LOOM
http://purl.obolibrary.org/obo/OBI_0002567 NGBO LOOM
http://purl.obolibrary.org/obo/OBI_0002567 OBCS LOOM
http://purl.obolibrary.org/obo/OBI_0002567 ONE LOOM
http://www.semanticweb.org/ontologies/2011/7/Ontology1314368515010.owl#Sequence_Alignment PHYLONT LOOM
https://www.codamono.com/biointerchange/gfvo#SequenceAlignment GFVO LOOM
http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C188688 NCIT LOOM
http://www.co-ode.org/ontologies/ont.owl#SequenceAlignment PHAGE LOOM
http://purl.obolibrary.org/obo/MESH_D016415 BERO LOOM
http://purl.bioontology.org/ontology/MESH/D016415 MESH LOOM