EDAM - The data analysis and management ontology - Gene expression - Classes

Last uploaded: February 26, 2021

Id	http://edamontology.org/topic_0203 http://edamontology.org/topic_0203
Preferred Name	Gene expression
Definitions	Gene expression levels are analysed by identifying, quantifying or comparing mRNA transcripts, for example using microarrays, RNA-seq, northern blots, gene-indexed expression profiles etc. This includes the study of codon usage in nucleotide sequence(s), genetic codes and so on. The analysis of levels and patterns of synthesis of gene products (proteins and functional RNA) including interpretation in functional terms of gene expression data.
Synonyms	DNA microarrays Transcription Codon usage Gene expression profiling Gene translation Gene transcription DNA chips Expression
Type	http://www.w3.org/2002/07/owl#Class

label	Gene expression
comment	Gene expression levels are analysed by identifying, quantifying or comparing mRNA transcripts, for example using microarrays, RNA-seq, northern blots, gene-indexed expression profiles etc. This includes the study of codon usage in nucleotide sequence(s), genetic codes and so on.
prefLabel	Gene expression
isdebtag	true
inSubset	http://edamontology.org/bio http://edamontology.org/events http://edamontology.org/topics
hasNarrowSynonym	DNA microarrays Transcription Codon usage Gene expression profiling Gene translation Gene transcription DNA chips See more See less
prefixIRI	topic_0203
seeAlso	https://en.wikipedia.org/wiki/Gene_expression http://purl.bioontology.org/ontology/MSH/D015870
subClassOf	http://edamontology.org/topic_3321
hasDefinition	The analysis of levels and patterns of synthesis of gene products (proteins and functional RNA) including interpretation in functional terms of gene expression data.
hasAlternativeId	http://edamontology.org/topic_0197
type	http://www.w3.org/2002/07/owl#Class
hasHumanReadableId	Gene_expression
hasExactSynonym	Expression
Created in	March 12, 2025

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