Preferred Name |
Transcription factors and regulatory sites |
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Synonyms |
-35 signals CAAT signals CpG islands Transcriptional regulatory sites TATA signals Terminators Transcription factors Transcription factor binding sites Attenuators -10 signals CAT box CCAAT box Enhancers GC signals Isochores Promoters TFBS |
|
Definitions |
Proteins that bind to DNA and control transcription of DNA to mRNA (transcription factors) and also transcriptional regulatory sites, elements and regions (such as promoters, enhancers, silencers and boundary elements / insulators) in nucleotide sequences. This includes promoters, CAAT signals, TATA signals, -35 signals, -10 signals, GC signals, primer binding sites for initiation of transcription or reverse transcription, enhancer, attenuator, terminators and ribosome binding sites. This includes CpG rich regions (isochores) in a nucleotide sequence. Transcription factor proteins either promote (as an activator) or block (as a repressor) the binding to DNA of RNA polymerase. Regulatory sites including transcription factor binding site as well as promoters, enhancers, silencers and boundary elements / insulators. |
|
ID |
http://edamontology.org/topic_0749 |
|
comment |
This includes promoters, CAAT signals, TATA signals, -35 signals, -10 signals, GC signals, primer binding sites for initiation of transcription or reverse transcription, enhancer, attenuator, terminators and ribosome binding sites. This includes CpG rich regions (isochores) in a nucleotide sequence. Transcription factor proteins either promote (as an activator) or block (as a repressor) the binding to DNA of RNA polymerase. Regulatory sites including transcription factor binding site as well as promoters, enhancers, silencers and boundary elements / insulators. |
|
Created in |
beta12orEarlier |
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hasDefinition |
Proteins that bind to DNA and control transcription of DNA to mRNA (transcription factors) and also transcriptional regulatory sites, elements and regions (such as promoters, enhancers, silencers and boundary elements / insulators) in nucleotide sequences. |
|
hasHumanReadableId |
Transcription_factors_and_regulatory_sites |
|
hasNarrowSynonym |
-35 signals CAAT signals CpG islands Transcriptional regulatory sites TATA signals Terminators Transcription factors Transcription factor binding sites Attenuators -10 signals CAT box CCAAT box Enhancers GC signals Isochores Promoters TFBS |
|
inSubset | ||
label |
Transcription factors and regulatory sites |
|
prefixIRI |
topic_0749 |
|
prefLabel |
Transcription factors and regulatory sites |
|
seeAlso | ||
subClassOf |
http://edamontology.org/topic_3125 |
Delete | Mapping To | Ontology | Source |
---|---|---|---|
http://edamontology.org/topic_0749 | BERO | SAME_URI | |
http://edamontology.org/topic_0749 | ITO | SAME_URI | |
http://edamontology.org/topic_0749 | BMT | SAME_URI | |
http://edamontology.org/topic_0749 | BERO | LOOM | |
http://edamontology.org/topic_0749 | ITO | LOOM | |
http://edamontology.org/topic_0749 | BMT | LOOM |